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Skew in CG content near the transcription start site in Arabidopsis thaliana
Journal article   Open access  Peer reviewed

Skew in CG content near the transcription start site in Arabidopsis thaliana

Tatiana Tatarinova, Vyacheslav Brover, Maxim Troukhan and Nickolai Alexandrov
BIOINFORMATICS, Vol.19(Suppl 1), pp.i313-i314
01/07/2003
PMID: 12855475

Abstract

Biochemical Research Methods Biochemistry & Molecular Biology Biotechnology & Applied Microbiology Computer Science Computer Science, Interdisciplinary Applications Life Sciences & Biomedicine Mathematical & Computational Biology Mathematics Physical Sciences Science & Technology Statistics & Probability Technology
We have discovered a novel statistical feature of Arabidopsis thaliana genome that remarkably correlates with a position of transcription start site-CG skew peak. We hypothesize that the phenomenon can be explained by the higher mutability of unprotected cytosines.
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https://doi.org/10.1093/bioinformatics/btg1043View
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